Mutually opposing activity of PIN7 splicing isoforms is required for auxin-mediated tropic responses in Arabidopsis thaliana
I. Kashkan, M. Hrtyan, K. Retzer, J. Humpolídková, A. Jayasree, R. Filepová, Z. Vondráková, S. Simon, D. Rombaut, T.B. Jacobs, M.J. Frilander, J. Hejátko, J. Friml, J. Petrásek, K. Rfeidka, New Phytologist 233 (2021) 329–343.

Molecular evolution and diversification of proteins involved in miRNA maturation pathway
T.R. Moturu, S. Sinha, H. Salava, S. Thula, T. Nodzyski, R.S. Vaeková, J. Friml, S. Simon, Plants 9 (2020).

NHX antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development
L. Fan, L. Zhao, W. Hu, W. Li, O. Novák, M. Strnad, S. Simon, J. Friml, J. Shen, L. Jiang, Q. Qiu, Plant, Cell and Environment 41 (2018) 850–864.

PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis
S. Simon, P. Skfpa, T. Viaene, M. Zwiewka, R. Tejos, P. Klíma, M. carná, J. Roldík, R. De Rycke, I. Moreno, P. Dobrev, A. Orellana, E. Zaeímalová, J. Friml, New Phytologist 211 (2016) 65–74.

Asymmetric localizations of the ABC transporter PaPD trace paths of directional strigolactone transport
J. Sasse, S. Simon, C. Gübeli, G. Liu, X. Cheng, J. Friml, H. Bouwmeester, E. Martinoia, L. Borghi, Current Biology 25 (2015) 647–655.

Auxin-binding pocket of AB is crucial for its gain-of-function cellular and developmental roles
P. Grones, X. Chen, S. Simon, W. Kaufmann, R. De Rycke, T. Nodzyski, E. Zaeímalová, J. Friml, Journal of Experimental Botany 66 (2015) 5055–5065.

Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters
S. Simon, P. Skfpa, P. Dobrev, J. Petrásek, E. Zaeímalová, J. Friml, in:, G. Hicks, S. Robert (Eds.), Plant Chemical Genomics, Springer, 2014, pp. 255–264.

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development
C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).

The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIV in arabidopsis
S. Di Rubbo, N. Irani, S. Kim, Z. Xu, A. Gadeyne, W. Dejonghe, I. Vanhoutte, G. Persiau, D. Eeckhout, S. Simon, K. Song, J. Kleine Vehn, J. Friml, G. De Jaeger, D. Van Damme, I. Hwang, E. Russinova, Plant Cell 25 (2013) 2986–2997.

Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid
A. Pbndík, B. Simonovik, S. Petersson, E. Henyková, S. Simon, K. Greenham, Y. Zhang, M. Kowalczyk, M. Estelle, E. Zaeímalová, O. Novák, G. Sandberg, K. Ljung, Plant Cell 25 (2013) 3858–3870.

Defining the selectivity of processes along the auxin response chain: A study using auxin analogues
S. Simon, M. Kubes, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrásek, E. Zaeímalová, New Phytologist 200 (2013) 1034–1048.

ER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development in Arabidopsis
Z. Ding, B. Wang, I. Moreno, N. Dupláková, S. Simon, N. Carraro, J. Reemmer, A. Pbndík, X. Chen, R. Tejos, P. Skfpa, S. Pollmann, J. Mravec, J. Petrásek, E. Zaeímalová, D. Honys, J. Roldík, A. Murphy, A. Orellana, M. Geisler, J. Friml, Nature Communications 3 (2012).

Probing plant membranes with FM dyes: Tracking dragging or blocking?
A. Jelínková, K. Malínská, S. Simon, J. Kleine Vehn, M. Paezová, P. Pejchar, M. Kubes, J. Martinec, J. Friml, E. Zaeímalová, J. Petrásek, Plant Journal 61 (2010) 883–892.

AB mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis
S. Robert, J. Kleine Vehn, E. Barbez, M. Sauer, T. Paciorek, P. Baster, S. Vanneste, J. Zhang, S. Simon, M. covanová, K. Hayashi, P. Dhonukshe, Z. Yang, S. Bednarek, A. Jones, C. Luschnig, F. Aniento, E. Zaeímalová, J. Friml, Cell 143 (2010) 111–121.

Cytokinin regulates root meristem activity via modulation of the polar auxin transport
K. Rfeidka, M. Simásková, J. Duclercq, J. Petrásek, E. Zaeímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.