Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain
F. Lombardi, S. Pepic, O. Shriki, G. Tkadik, D. De Martino, Nature Computational Science 3 (2023) 254–263.

Dynamic pathogen detection and social feedback shape collective hygiene in ants
B.E. Casillas Perez, K. Bodova, A.V. Grasse, G. Tkadik, S. Cremer, Nature Communications 14 (2023).

Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories
M. Reinhardt, G. Tkadik, P.R. Ten Wolde, Physical Review X 13 (2023).

The structure of hippocampal C interactions optimizes spatial coding across experience
M. Nardin, J.L. Csicsvari, G. Tkadik, C. Savin, The Journal of Neuroscience 43 (2023) 8140–8156.

Predicting bacterial promoter function and evolution from random sequences
M. Lagator, S. Sarikas, M. Steinrueck, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkadik, ELife 11 (2022).

Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkadik, Proceedings of the National Academy of Sciences 119 (2022).

Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkadik, Current Opinion in Systems Biology 31 (2022).

Efficient coding theory of dynamic attentional modulation
W.F. Mlynarski, G. Tkadik, PLoS Biology 20 (2022) e3001889.

The structure of hippocampal C interactions optimizes spatial coding across experience
M. Nardin, J.L. Csicsvari, G. Tkadik, C. Savin, BioRxiv (n.d.).

Token-driven totally asymmetric simple exclusion process
B. Kavcic, G. Tkadik, ArXiv (n.d.).

Quantifying the coexistence of neuronal oscillations and avalanches
F. Lombardi, S. Pepic, O. Shriki, G. Tkadik, D. De Martino, (n.d.).

Statistical analysis and optimality of neural systems
W.F. Mlynarski, M. Hledik, T.R. Sokolowski, G. Tkadik, Neuron 109 (2021) 1227–1241.e5.

Minimal biophysical model of combined antibiotic action
B. Kavcic, G. Tkadik, M.T. Bollenbach, PLOS Computational Biology 17 (2021).

The many bits of positional information
G. Tkadik, T. Gregor, Development 148 (2021).

Inferring the function performed by a recurrent neural network
M.J. Chalk, G. Tkadik, O. Marre, PLoS ONE 16 (2021).

Gene amplification as a form of population-level gene expression regulation
I. Tomanek, R. Grah, M. Lagator, A.M.C. Andersson, J.P. Bollback, G. Tkadik, C.C. Guet, Nature Ecology &; Evolution 4 (2020) 612–625.

Clustering of neural activity: A design principle for population codes
M.J. Berry, G. Tkadik, Frontiers in Computational Neuroscience 14 (2020).

A minimal biophysical model of combined antibiotic action
B. Kavcic, G. Tkadik, M.T. Bollenbach, BioRxiv (2020).

Normative models of enhancer function
R. Grah, B. Zoller, G. Tkadik, BioRxiv (2020).

Mechanisms of drug interactions between translation-inhibiting antibiotics
B. Kavcic, G. Tkadik, M.T. Bollenbach, Nature Communications 11 (2020).